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Applied Maths bionumerics v6.5
Bionumerics V6.5, supplied by Applied Maths, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bionumerics+v6%2E5/bionumerics+software/pm37453006-35-74-76
Average 90 stars, based on 1 article reviews
bionumerics v6.5 - by Bioz Stars, 2026-09
90/100 stars

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Related Articles

Lysis:

Article Title: Clonal dissemination of vancomycin-resistant Enterococcus faecium ST412 in a Brazilian region.
Article Snippet: Genomic DNA from E. faecium was extracted following the method described by thermal lysis and used as template for multiplex PCR of the van genes, as previously described by Depardieu et al.9 Pulsed-field gel electrophoresis (PFGE) was performed after macrorestriction with SmaI in a CHEF-DRIII system (Bio-Rad, USA), according to Saeedi et al.,12 and analyzed with Bionumerics v6.5 (Applied Maths, Belgium) using the unweighted pair-group method with the arithmetic mean (UPGMA) applying the Dice correlation coefficient.

Article Title: Emergence of Antimicrobial-Resistant Escherichia coli of Animal Origin Spreading in Humans
Article Snippet: BioNumerics v6.5 (Applied-Maths, Belgium) was used to perform minimum spanning tree analysis.

Article Title: Differences in resistance profiles and virulence genes among methicillin-resistant and methicillin-susceptible Staphylococcus aureus of different lineages at a public tertiary hospital.
Article Snippet: Band patterns were analyzed with BioNumerics v6.5 (Applied Maths, Belgium) using the Unweighted Pair Group Method (UPGMA) with the arithmetic mean based on Dice coefficients.

Article Title: Cycloheximide-Producing Streptomyces Associated With Xyleborinus saxesenii and Xyleborus affinis Fungus-Farming Ambrosia Beetles
Article Snippet: All sequences were assembled using Bionumerics v6.5 (Applied Maths), searched against the GenBank Nucleotide Sequence Database ( ) using BLAST ( ) to determine a preliminary identity, and then aligned in MEGA5 ( ) using MUSCLE ( ).

Article Title: Longitudinal evaluation of clinical and colonization methicillin-resistant Staphylococcus aureus isolates among veterans.
Article Snippet: Infection Control & Hospital Epidemiology / Volume 36 / Issue 05 / May 2015, pp 587 589 DOI: 10.1017/ice.2015.14, Published online: 05 February 2015 Link to this article: http://journals.cambridge.org/abstract_S0899823X15000148 How to cite this article: Edward Stenehjem, Emily K. Crispell, David Rimland, Monica M. Farley and Sarah W. Satola (2015).. Longitudinal Evaluation of Clinical and Colonization Methicillin-Resistant Staphylococcus aureus Isolates Among Veterans.. Infection Control & Hospital Epidemiology, 36, pp 587-589 doi:10.1017/ice.2015.14 Request Permissions : Click here

Article Title: Pollen Streptomyces Produce Antibiotic That Inhibits the Honey Bee Pathogen Paenibacillus larvae
Article Snippet: 16S sequences were assembled using Bionumerics v6.5 (Applied Maths).

Article Title: Antimicrobial resistance and genetic diversity in ceftazidime non-susceptible bacterial pathogens from ready-to-eat street foods in three Taiwanese cities
Article Snippet: Dendrogram of pulsotype relationships identified by unweighted pair group method with arithmetic mean (UPGMA) (BioNumerics v6.5, Applied Maths).

Multiplex Assay:

Article Title: Clonal dissemination of vancomycin-resistant Enterococcus faecium ST412 in a Brazilian region.
Article Snippet: Genomic DNA from E. faecium was extracted following the method described by thermal lysis and used as template for multiplex PCR of the van genes, as previously described by Depardieu et al.9 Pulsed-field gel electrophoresis (PFGE) was performed after macrorestriction with SmaI in a CHEF-DRIII system (Bio-Rad, USA), according to Saeedi et al.,12 and analyzed with Bionumerics v6.5 (Applied Maths, Belgium) using the unweighted pair-group method with the arithmetic mean (UPGMA) applying the Dice correlation coefficient.

Article Title: Emergence of Antimicrobial-Resistant Escherichia coli of Animal Origin Spreading in Humans
Article Snippet: BioNumerics v6.5 (Applied-Maths, Belgium) was used to perform minimum spanning tree analysis.

Article Title: Differences in resistance profiles and virulence genes among methicillin-resistant and methicillin-susceptible Staphylococcus aureus of different lineages at a public tertiary hospital.
Article Snippet: Band patterns were analyzed with BioNumerics v6.5 (Applied Maths, Belgium) using the Unweighted Pair Group Method (UPGMA) with the arithmetic mean based on Dice coefficients.

Article Title: Cycloheximide-Producing Streptomyces Associated With Xyleborinus saxesenii and Xyleborus affinis Fungus-Farming Ambrosia Beetles
Article Snippet: All sequences were assembled using Bionumerics v6.5 (Applied Maths), searched against the GenBank Nucleotide Sequence Database ( ) using BLAST ( ) to determine a preliminary identity, and then aligned in MEGA5 ( ) using MUSCLE ( ).

Article Title: Longitudinal evaluation of clinical and colonization methicillin-resistant Staphylococcus aureus isolates among veterans.
Article Snippet: Infection Control & Hospital Epidemiology / Volume 36 / Issue 05 / May 2015, pp 587 589 DOI: 10.1017/ice.2015.14, Published online: 05 February 2015 Link to this article: http://journals.cambridge.org/abstract_S0899823X15000148 How to cite this article: Edward Stenehjem, Emily K. Crispell, David Rimland, Monica M. Farley and Sarah W. Satola (2015).. Longitudinal Evaluation of Clinical and Colonization Methicillin-Resistant Staphylococcus aureus Isolates Among Veterans.. Infection Control & Hospital Epidemiology, 36, pp 587-589 doi:10.1017/ice.2015.14 Request Permissions : Click here

Article Title: Pollen Streptomyces Produce Antibiotic That Inhibits the Honey Bee Pathogen Paenibacillus larvae
Article Snippet: 16S sequences were assembled using Bionumerics v6.5 (Applied Maths).

Article Title: Antimicrobial resistance and genetic diversity in ceftazidime non-susceptible bacterial pathogens from ready-to-eat street foods in three Taiwanese cities
Article Snippet: Dendrogram of pulsotype relationships identified by unweighted pair group method with arithmetic mean (UPGMA) (BioNumerics v6.5, Applied Maths).

Polymerase Chain Reaction:

Article Title: Clonal dissemination of vancomycin-resistant Enterococcus faecium ST412 in a Brazilian region.
Article Snippet: Genomic DNA from E. faecium was extracted following the method described by thermal lysis and used as template for multiplex PCR of the van genes, as previously described by Depardieu et al.9 Pulsed-field gel electrophoresis (PFGE) was performed after macrorestriction with SmaI in a CHEF-DRIII system (Bio-Rad, USA), according to Saeedi et al.,12 and analyzed with Bionumerics v6.5 (Applied Maths, Belgium) using the unweighted pair-group method with the arithmetic mean (UPGMA) applying the Dice correlation coefficient.

Article Title: Emergence of Antimicrobial-Resistant Escherichia coli of Animal Origin Spreading in Humans
Article Snippet: BioNumerics v6.5 (Applied-Maths, Belgium) was used to perform minimum spanning tree analysis.

Article Title: Differences in resistance profiles and virulence genes among methicillin-resistant and methicillin-susceptible Staphylococcus aureus of different lineages at a public tertiary hospital.
Article Snippet: Band patterns were analyzed with BioNumerics v6.5 (Applied Maths, Belgium) using the Unweighted Pair Group Method (UPGMA) with the arithmetic mean based on Dice coefficients.

Article Title: Cycloheximide-Producing Streptomyces Associated With Xyleborinus saxesenii and Xyleborus affinis Fungus-Farming Ambrosia Beetles
Article Snippet: All sequences were assembled using Bionumerics v6.5 (Applied Maths), searched against the GenBank Nucleotide Sequence Database ( ) using BLAST ( ) to determine a preliminary identity, and then aligned in MEGA5 ( ) using MUSCLE ( ).

Article Title: Longitudinal evaluation of clinical and colonization methicillin-resistant Staphylococcus aureus isolates among veterans.
Article Snippet: Infection Control & Hospital Epidemiology / Volume 36 / Issue 05 / May 2015, pp 587 589 DOI: 10.1017/ice.2015.14, Published online: 05 February 2015 Link to this article: http://journals.cambridge.org/abstract_S0899823X15000148 How to cite this article: Edward Stenehjem, Emily K. Crispell, David Rimland, Monica M. Farley and Sarah W. Satola (2015).. Longitudinal Evaluation of Clinical and Colonization Methicillin-Resistant Staphylococcus aureus Isolates Among Veterans.. Infection Control & Hospital Epidemiology, 36, pp 587-589 doi:10.1017/ice.2015.14 Request Permissions : Click here

Article Title: Pollen Streptomyces Produce Antibiotic That Inhibits the Honey Bee Pathogen Paenibacillus larvae
Article Snippet: 16S sequences were assembled using Bionumerics v6.5 (Applied Maths).

Article Title: Antimicrobial resistance and genetic diversity in ceftazidime non-susceptible bacterial pathogens from ready-to-eat street foods in three Taiwanese cities
Article Snippet: Dendrogram of pulsotype relationships identified by unweighted pair group method with arithmetic mean (UPGMA) (BioNumerics v6.5, Applied Maths).

Pulsed-Field Gel:

Article Title: Clonal dissemination of vancomycin-resistant Enterococcus faecium ST412 in a Brazilian region.
Article Snippet: Genomic DNA from E. faecium was extracted following the method described by thermal lysis and used as template for multiplex PCR of the van genes, as previously described by Depardieu et al.9 Pulsed-field gel electrophoresis (PFGE) was performed after macrorestriction with SmaI in a CHEF-DRIII system (Bio-Rad, USA), according to Saeedi et al.,12 and analyzed with Bionumerics v6.5 (Applied Maths, Belgium) using the unweighted pair-group method with the arithmetic mean (UPGMA) applying the Dice correlation coefficient.

Article Title: Emergence of Antimicrobial-Resistant Escherichia coli of Animal Origin Spreading in Humans
Article Snippet: BioNumerics v6.5 (Applied-Maths, Belgium) was used to perform minimum spanning tree analysis.

Article Title: Differences in resistance profiles and virulence genes among methicillin-resistant and methicillin-susceptible Staphylococcus aureus of different lineages at a public tertiary hospital.
Article Snippet: Band patterns were analyzed with BioNumerics v6.5 (Applied Maths, Belgium) using the Unweighted Pair Group Method (UPGMA) with the arithmetic mean based on Dice coefficients.

Article Title: Cycloheximide-Producing Streptomyces Associated With Xyleborinus saxesenii and Xyleborus affinis Fungus-Farming Ambrosia Beetles
Article Snippet: All sequences were assembled using Bionumerics v6.5 (Applied Maths), searched against the GenBank Nucleotide Sequence Database ( ) using BLAST ( ) to determine a preliminary identity, and then aligned in MEGA5 ( ) using MUSCLE ( ).

Article Title: Longitudinal evaluation of clinical and colonization methicillin-resistant Staphylococcus aureus isolates among veterans.
Article Snippet: Infection Control & Hospital Epidemiology / Volume 36 / Issue 05 / May 2015, pp 587 589 DOI: 10.1017/ice.2015.14, Published online: 05 February 2015 Link to this article: http://journals.cambridge.org/abstract_S0899823X15000148 How to cite this article: Edward Stenehjem, Emily K. Crispell, David Rimland, Monica M. Farley and Sarah W. Satola (2015).. Longitudinal Evaluation of Clinical and Colonization Methicillin-Resistant Staphylococcus aureus Isolates Among Veterans.. Infection Control & Hospital Epidemiology, 36, pp 587-589 doi:10.1017/ice.2015.14 Request Permissions : Click here

Article Title: Pollen Streptomyces Produce Antibiotic That Inhibits the Honey Bee Pathogen Paenibacillus larvae
Article Snippet: 16S sequences were assembled using Bionumerics v6.5 (Applied Maths).

Article Title: Antimicrobial resistance and genetic diversity in ceftazidime non-susceptible bacterial pathogens from ready-to-eat street foods in three Taiwanese cities
Article Snippet: Dendrogram of pulsotype relationships identified by unweighted pair group method with arithmetic mean (UPGMA) (BioNumerics v6.5, Applied Maths).



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